| Network Data Sets
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Protein Folding |
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| Name | Nodes | Links | Date | Brief Description | Source | Citation |
| Beta3s | 132168 | 249704 | 2003 | Conformation space network of a 20 residue antiparallel beta-sheet peptide sampled by molecular dynamics simulations. Snapshots saved along the trajectory are grouped according to secondary structure into nodes of the network and the transitions between them are links. | Caflisch group, University of Zurich | F. Rao and A. Caflsich, J. Mol. Biol. 342, 299-306 (2004) |
| Beta3s reduced | 1287 | 33813 | 2003 | Reduced version of the network above. Only conformations that are visited at least 20 times during the simulation are considered in the building of the network. | Caflisch group, University of Zurich | F. Rao and A. Caflsich, J. Mol. Biol. 342, 299-306 (2004) |
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